Congratulations to Bianca Dumitrascu on being named one of the recipients of the 2023 DSI Seed Funds Program.

The Data Science Institute’s Seed Funds Program supports new collaborations with the goal of developing longer-term and deeper interdisciplinary relationships among faculty at Columbia. Aimed at advancing research that combines data science with domain expertise, selected projects embody the spirit of DSI’s mission, and address the technical strengths needed to create more fair and ethical use of data.

For 2023, the Institute has selected five outstanding projects, reflecting solution-oriented approaches to issues in healthcare access and social inequalities; disease diagnosis and treatment; cybersecurity and public policy; and materials science and discovery. The awarded research teams will accelerate their projects over the course of the next year, with access to DSI’s extensive network of scientists, scholars, and technical experts.

Interventional Representation Learning for Intelligent Wound Healing Strategies
• Yvon L. Woappi, Physiology & Cellular Biophysics, Dermatology, Columbia University Medical Center; and Biomedical Engineering, Columbia Engineering
• Bianca Dumitrascu, Statistics, Graduate School of Arts and Sciences; and Irving Institute for Cancer Dynamics (IICD)

The complex cellular events necessary to achieve mammalian tissue regeneration remain unknown. Our research pairs machine learning-powered gene target identification with high-throughput interventional functional genomics to pinpoint the causal genetic and molecular combinatorial changes necessary to promote wound regeneration.

For a full list of recipients and the original post read here.

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Before data analysis: Additional recommendations for designing experiments to learn about the world.
Andrew Gelman (2023).
Pathfinder: Parallel quasi-Newton variational inference.
Andrew Gelman (2022).
Toward a taxonomy of trust for probabilistic machine learning. Science Advances, 9(7), eabn3999.
Broderick, T., Gelman, A., Meager, R., Smith, A. L., & Zheng, T. (2023).
Taylor's law of fluctuation scaling for semivariances and higher moments of heavy tailed data, (PNAS November 16,2021)
Brown, M., Cohen, J.E., Tang, C-F., & Yam, S.C.P. (2021).
Privacy-preserving parametric inference: a case for robust statistics. Journal of the American Statistical Association, 116(534), 969-983.
Avella-Medina, M. (2021).
Heavy-tailed distributions, correlations, kurtosis, and Taylor’s law of fluctuation scaling. Proceedings of the Royal Society A 476:20200610.
J. E. Cohen, Richard A. Davis, Gennady Samorodnitsky (2020).
Robust estimation of superhedging prices. The Annals of Statistics, 49(1), 508-530
Obłój, J., & Wiesel, J. (2021).
Estimating causal effects in studies of human brain function: New models, methods and estimands. The annals of applied statistics, 14(1), 452.
Sobel, M. E., & Lindquist, M. A. (2020).
A note on the Screaming Toes game. arXiv preprint arXiv:2006.04805.
Tavaré, S. (2020).
Testing for stationarity of functional time series in the frequency domain. The Annals of Statistics, 48(5), 2505-2547.
Aue, A., & Van Delft, A. (2020).
Distinguishing cause from effect using quantiles: Bivariate quantile causal discovery. In International Conference on Machine Learning (pp. 9311-9323). PMLR.
Tagasovska, N., Chavez-Demoulin, V., & Vatter, T. (2020, November).
Large‐scale, image‐based tree species mapping in a tropical forest using artificial perceptual learning. Methods in Ecology and Evolution, 12(4), 608-618.
Tang, C., Uriarte, M., Jin, H., C Morton, D., & Zheng, T. (2021).
Optimal stopping and worker selection in crowdsourcing: An adaptive sequential probability ratio test framework. Statistica Sinica, 31(1), 519-546.
Li, X., Chen, Y., Chen, X., Liu, J., & Ying, Z. (2021)
Revisiting colocalization via optimal transport. Nature Computational Science, 1(3), 177-178.
Wang, S., & Yuan, M. (2021).
Multivariate rank-based distribution-free nonparametric testing using measure transportation. Journal of the American Statistical Association, (just-accepted), 1-45.
Deb, N., & Sen, B. (2021).
From Decoupling and Self-Normalization to Machine Learning
Victor H. de la Pena
Capacity-Achieving Sparse Superposition Codes via Approximate Message Passing Decoding
Cynthia Rush, Adam Greig, Ramji Venkataramanan
Slice Sampling on Hamiltonian Trajectories
John P. Cunningham, Benjamin Bloem-Reddy
Feature Augmentation via Nonparametrics and Selection (FANS) in High Dimensional Classification
Fan, J., Feng, Y., Jiang, J. and Tong, X.
Asset pricing with general transaction costs: Theory and numerics. Mathematical Finance, 31(2), 595-648.
Gonon, L., Muhle‐Karbe, J., & Shi, X. (2021).
Convergence to the mean-field game limit: a case study. The Annals of Applied Probability, 30(1), 259-286.
Nutz, M., San Martin, J., & Tan, X. (2020).
An asymptotic rate for the LASSO loss. In International Conference on Artificial Intelligence and Statistics (pp. 3664-3673). PMLR.
Rush, C. (2020, June).
Credit Risk, Liquidity, and Bubbles. International Review of Finance, 20(3), 737-746.
Jarrow, R., & Protter, P. (2020).
Neural clustering processes. In International Conference on Machine Learning (pp. 7455-7465). PMLR.
Pakman, A., Wang, Y., Mitelut, C., Lee, J., & Paninski, L. (2020, November).
Joint estimation of parameters in Ising model. The Annals of Statistics, 48(2), 785-810.
Ghosal, P., & Mukherjee, S. (2020).
Latent feature extraction for process data via multidimensional scaling. psychometrika, 85(2), 378-397.
Tang, X., Wang, Z., He, Q., Liu, J., & Ying, Z. (2020).
An Interaction-based Convolutional Neural Network (ICNN) Towards Better Understanding of COVID-19 X-ray Images. arXiv preprint arXiv:2106.06911.
Lo, S. H., & Yin, Y. (2021).
An adaptable generalization of Hotelling’s $ T^{2} $ test in high dimension. The Annals of Statistics, 48(3), 1815-1847.
Li, H., Aue, A., Paul, D., Peng, J., & Wang, P. (2020).
Self-Tuning Bandits over Unknown Covariate-Shifts. In Algorithmic Learning Theory (pp. 1114-1156). PMLR.
Suk, J., & Kpotufe, S. (2021, March).
A Joint MLE Approach to Large-Scale Structured Latent Attribute Analysis. Journal of the American Statistical Association, (just-accepted), 1-39.
Gu, Y., & Xu, G. (2021).
Bayesian statistics and modelling. Nature Reviews Methods Primers, 1(1), 1-26.
van de Schoot, R., Depaoli, S., King, R., Kramer, B., Märtens, K., Tadesse, M. G., ... & Yau, C. (2021).
On the bias and variance of odds ratio, relative risk and false discovery proportion. Communications in Statistics-Theory and Methods, 1-31.
Pang, G., Alemayehu, D., de la Peña, V., & Klass, M. J. (2020).
The continuous categorical: a novel simplex-valued exponential family. In International Conference on Machine Learning (pp. 3637-3647). PMLR.
Gordon-Rodriguez, E., Loaiza-Ganem, G., & Cunningham, J. (2020, November).
High-frequency analysis of parabolic stochastic PDEs. The Annals of Statistics, 48(2), 1143-1167.
Chong, C. (2020).
Count time series: A methodological review. Journal of the American Statistical Association, 1-15.
Davis, R. A., Fokianos, K., Holan, S. H., Joe, H., Livsey, J., Lund, R., ... & Ravishanker, N. (2021).
A Proxy Variable View of Shared Confounding. In International Conference on Machine Learning (pp. 10697-10707). PMLR.
Wang, Y., & Blei, D. (2021, July).
Topic-adjusted visibility metric for scientific articles. Ann. Appl. Stat. 10 (2016), no. 1, 1--31.
Linda S. L. Tan, Aik Hui Chan, and Tian Zheng
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